API Reference

API Documentation

• Decomposition (Estimators)
  • pySPFM.SparseDeconvolution
  • pySPFM.LowRankPlusSparse
  • pySPFM.StabilitySelection
  • Overview
  • Univariate vs Multivariate Mode
  • SparseDeconvolution
  • LowRankPlusSparse
  • StabilitySelection
• Command-Line Interface
  • pySPFM.cli.run
  • pySPFM.cli.auc_to_estimates
• Solvers (Internal)
  • pySPFM._solvers.debiasing
  • pySPFM._solvers.fista
  • pySPFM._solvers.hrf_generator
  • pySPFM._solvers.lars
  • pySPFM._solvers.select_lambda
  • pySPFM._solvers.spatial_regularization
  • pySPFM._solvers.stability_selection
• Input/Output
  • pySPFM.io.read_data
  • pySPFM.io.update_header
  • pySPFM.io.write_data
  • pySPFM.io.write_json
• Utilities
  • pySPFM.utils.setup_loggers
  • pySPFM.utils.teardown_loggers